Job Description Q46841 Confidence 2.24% Date Wed Jan 25 15:21:13 GMT 2012 Rank 71 Aligned Residues 304 % Identity 5% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		H	W	F	A	D	G	A	F	R	T	I	I	R	N	S	A	W	L	G	S	S	N	V	V	S	A	L	L	G	L	L	A	L	S	C	A	G	K	G	.	.	M	T	P	A	M	F	G	V	L	V	I	V	Q	S	Y	A	K	S	I	S	D	F	I	K	F	Q	T	W	Q	L	V	V	Q	Y	G	T	P	A	L
Query Conservation																																									.	.
Alig confidence							.	.	.																																.	.																										.	.	.	.	.	.	.	.
Template Conservation							.	.	.																																																											.	.	.	.	.	.	.	.
Template Sequence		Y	Y	L	K	N	.	.	.	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	.	.	.	.	.	.	.	.	L	L	S	D	K	L
Template Known Secondary structure						S	.	.	.																																																					T						.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.																																																											.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.				.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	N	N	P	Q	Q	F	R	N	V	V	S	F	S	F	S	L	D	I	V	S	G	A	V	A	I	V	G	G	I	A	L	L	P	F	L	S	H	S	L	G	L	D	D	Q	S	F	W	L	A	A	L	Y	C	T	L	I	P	S	M	A	S	S	T	P	T	G	I	L	R	A	V	D	R	F	D	L	I	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	W	I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S
Template Known Secondary structure		T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T								T							T	T								T	T	T	T	G	G	G	G	G	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.															.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	A	T	K	P	F	L	R	A	A	G	S	V	V	A	W	Y	F	D	F	G	F	A	G	F	V	I	A	W	Y	V	S	N	L	V	G	G	T	M	Y	W	W	F	A	A	R	E	L	R	R	R	N	I	H	N	A	F	K	L	N	L	F	E	S	A	R	Y	I	K	G	A	W	S	F	V	W	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L
Template Known Secondary structure		S																																																	S	S				S		S	S	S		S	S					S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	H	S	I	W	S	A	R	N	S	C	S	T	V	L	V	G	I	V	L	G	P	A	A	A	G	L	F	K	I	A	M	T	F	F	D	A	A	G	T	P	A	G	L	L	G	K	S	F	Y	P	E	V	M	R	L	D	P	R	T	T	R	P	W	L	L	G	V	K	S	G	L	L	A	G	G	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G
Template Known Secondary structure		T	T	S	S																												T	T	S	S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	A	L	A	V	L	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	M	S	V	R	I	I	G	S	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions