Return to main results Retrieve Phyre Job Id

Job DescriptionQ46841
Confidence2.15%DateWed Jan 25 15:21:13 GMT 2012
Rank78Aligned Residues58
% Identity5%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   296...300.........310.........320.........330.........340.........350...
Predicted Secondary structure 





Query SS confidence 

























































Query Sequence  FYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLEAYD
Query Conservation    
  
                                     

 
  
  
  
  
Alig confidence 

























































Template Conservation                                                            
Template Sequence  WRPLFVKTETIIAGNAATALVALVFSILTGSALGIIGYGLLMAVTGALIDESLVEKAN
Template Known Secondary structure 
TTTBTT
BTT



Template Predicted Secondary structure 


Template SS confidence 

























































   564.....570.........580.........590.........600.........610.........620.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions