Return to main results Retrieve Phyre Job Id

Job DescriptionP06968
Confidence12.23%DateThu Jan 5 10:59:35 GMT 2012
Rank39Aligned Residues32
% Identity22%Templatec3gzuB_
PDB info PDB header:virusChain: B: PDB Molecule:inner capsid protein vp2; PDBTitle: vp7 recoated rotavirus dlp
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130...... ...140.....
Predicted Secondary structure 









..








Query SS confidence 






















. .








Query Sequence  ERIAQMIFVPVVQAEFNLVEDFD. . ATDRGEGGF
Query Conservation   





           
  
 .. 
 

  

Alig confidence 






















..








Template Conservation    
 


   
  
 
   
  
  

      
Template Sequence  DKIAQGVIIAYRDMQLERDEMYGYVNIARNLDGF
Template Known Secondary structure  SS


TTT
B
S


SS
Template Predicted Secondary structure 













Template SS confidence 

































   697..700.........710.........720.........730
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions