|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | D | V | K | I | L | D | P | R | V | G | K | E | F | P | L | P | T | Y | A | T | S | G | S | A | G | L | D | L | R | A | C | L | N | D | A | V | E | L | A | P | G | D | T | T | L | V | P | T | G | L | A | I | H | I | A | D | P | S | L | A | A | M | M | L | P | R | S | G | L | G | H | K | H | G | I | V | L | G |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |
|
| . | . |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |   | . | . |
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   | . |
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|   |   | . |
Template Sequence |   |
S | P | F | F | K | V | . |
. |
K | K | L | S | E | K | A | V | I | P | T | R | G | S | P | L | S | A | G | Y | D | L | S | S | A | . |
. |
V | D | S | K | V | P | A | R | G | K | A | L | I | P | T | D | L | S | I | A | V | P | E | . |
G | T | Y | A | R | I | A | P | R | S | G | L | A | W | K | H | S | I | D | V | . |
Template Known Secondary structure |   |
|
|
|
|  |  | . | . |  |  | S | S | T | T |
|
|
|
|  |  | S | S | T | T |
| S |
|  |  |  |  |
| S | . | . | S |
|  |  |  |
| T | T |
|  |  |  |  |  |
|
|  |  |  |  |
|
| T | . | T |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | V | G | L | I | D | S | D | Y | Q | G | Q | L | M | I | S | V | W | N | R | G | Q | D | S | F | T | I | Q | P | G | E | R | I | A | Q | M | I | F | V | P | V | V | Q | A | E | F | N | L | V | E | D |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |
|
|
|
|   |
|
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
. |
G | A | G | V | I | D | A | D | Y | R | G | P | V | G | V | I | L | F | N | H | S | D | A | D | F | E | V | K | F | G | D | R | I | A | Q | L | I | I | E | K | I | V | T | P | D | V | V | E | V | D | D |
Template Known Secondary structure |   |
. | S |
|
|  |  |  | T | T |
|
| S |
|
|  |  |  |  |  |  |
| S | S | S |
|  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
. |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |