Return to main results Retrieve Phyre Job Id

Job DescriptionP07650
Confidence93.35%DateWed Jan 25 15:20:12 GMT 2012
Rank27Aligned Residues53
% Identity19%Templated1vf7a_
SCOP infoHlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350.........360.........370.........380.........390.........400........ .410.....
Predicted Secondary structure 




































.
Query SS confidence 







































































.






Query Sequence  AMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDEN. NWQEAAK
Query Conservation          
   
 
  
            



    
  
   

 
    
  
  
  
  
      .       
Alig confidence 















...............................
























.






Template Conservation 
     
 
 
 
 
 ............................... 
 
  

 
 

  
  

             
Template Sequence  AFRIAEVRPQVNGIIL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KRLFKEGSDVKAGQQLYQIDPATYEADYQSAQA
Template Known Secondary structure  S


SS
...............................

S
SS
TTS

Template Predicted Secondary structure 




...............................









Template SS confidence 















































































   37..40.........50.. .......60.........70.........80.....
 
   416...420
Predicted Secondary structure 
Query SS confidence 




Query Sequence  AVKAA
Query Conservation      
Alig confidence 




Template Conservation       
Template Sequence  NLAST
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   86...90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions