|   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | D | W | K | S | L | H | L | N | G | P | I | V | D | K | H | S | T | G | G | V | G | D | V | T | S | L | M | L | G | P | M | V | A | A | C | G | G | Y | I | P | M | I | S | G | R | G | L | G | H | T | G | G | T | L | D | K | L | E | S | I | P | G | F | D | I | F | P | D | D | N | R | F | R | E | I | I | K | D |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   | . |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
Q | L | E | W | P | E | . |
A | W | R | Q | Q | L | V | D | K | H | S | T | G | G | V | G | D | K | V | S | L | V | L | A | P | A | L | A | A | C | G | C | K | V | P | M | I | S | G | R | G | L | G | H | T | G | G | T | L | D | K | L | E | S | I | P | G | F | N | V | I | Q | S | P | E | Q | M | Q | V | L | L | D | Q |
Template Known Secondary structure |   |
|
|
|
|
| G | . | G | G | G | G | G | B |  |  |  |  |  | S |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |
| B |  |  |  |  |
|
|
|
| B | T | T | B |
|
|  |  |  |  |  | T | T | S | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | V | A | I | I | G | Q | T | S | S | L | A | P | A | D | K | R | F | Y | A | T | R | D | I | T | A | T | V | D | S | I | P | L | I | T | A | S | I | L | A | K | K | L | A | E | G | L | D | A | L | V | M | D | V | K | V | G | S | G | A | F | M | P | T | Y | E | L | S | E | A | L | A | E | A | I | V | G | V | A |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
A | G | C | C | I | V | G | Q | S | E | Q | L | V | P | A | D | G | I | L | Y | A | A | R | D | V | T | A | T | V | D | S | L | P | L | I | T | A | S | I | L | S | K | K | L | V | E | G | L | S | A | L | V | V | D | V | K | F | . |
. |
G | A | V | F | P | N | Q | E | Q | A | R | E | L | A | K | T | L | V | G | V | G |
Template Known Secondary structure |   |
 | S |  |  |  |  |
|
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | A | G | V | R | T | T | A | L | L | T | D | M | N | Q | V | L | A | S | S | A | G | N | A | V | E | V | R | E | A | V | Q | F | L | T | G | E | Y | R | N | P | R | L | F | D | V | T | M | A | L | C | V | E | M | L | I | S | G | K | L | A | K | D | D | A | E | A | R | A | K | L | Q | A | V | L | D | N | G | K |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   | . |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
Template Sequence |   |
A | S | L | G | L | R | V | A | A | A | L | T | A | M | D | K | P | L | G | R | C | V | G | H | A | L | E | V | E | E | A | L | L | C | M | D | G | A | . |
G | P | P | D | L | R | D | L | V | T | T | L | G | G | A | L | L | W | L | S | G | H | A | G | T | Q | A | Q | G | A | A | R | V | A | A | A | L | D | D | G | S |
Template Known Secondary structure |   |
 |  | T | T |
|
|  |  |  |  |  |  |  |
| S | S |
| S | T | T |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
  |
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | E | V | F | G | R | M | V | A | A | Q | K | G | P | T | D | F | V | E | N | Y | A | K | Y | L | P | T | A | M | L | T | K | A | V | Y |
Query Conservation |   |
|   |   |
|
|   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | G | R | F | E | R | M | L | A | A | Q | G | V | D | P | G | L | A | R | A | L | C | S | G | S | P | . |
. |
A | E | R | R | Q | L | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | S |
|  | . | . |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | |
|
. | . | . | . | 370 | . | . |
  |