 |
Job Description | P07650 | Confidence | 75.58% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 69 | Aligned Residues | 97 |
% Identity | 10% | Template | c1x1oC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8
|
Resolution | 1.90 Å |
|
 |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
. | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | K | A | A | E | V | F | G | R | M | V | A | A | Q | . |
. |
K | G | P | T | D | F | V | E | N | Y | A | K | Y | L | P | T | A | M | L | T | K | A | V | Y | A | D | T | E | G | F | V | S | E | M | D | T | R | A | L | G | M | A | V | V | A | M | G | G | G | R | R | Q | A | S | D | T | I | D | Y | S | V | G | F |
Query Conservation |   |
|
|
|
|   |   |
|
|   |   |   |
|   |
|
| . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|
|
| . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   | . | . |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
Template Sequence |   |
Q | G | G | L | E | E | A | L | R | A | W | L | R | E | D | L | G | Q | G | D | L | T | S | . |
. |
. |
L | L | V | V | P | E | D | L | E | G | E | A | V | I | L | A | K | E | G | G | V | L | A | G | L | W | . |
. |
V | A | E | R | V | F | A | L | A | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | T | A | F |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | . | . | . |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  | S | S |
|  |  |
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |
| T | . | . | . | . | . | . | . | . | . | . | . | T |
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  | . | . |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | M | A | R | L | G | D | Q | V | D | G | Q | R | P | L | A | V | I | H | A | K | D | E | N | N | W | Q | E | A | A | K | A | V | K | A |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   | . |   |   |   |   |   |
|
|   |   |
|
|
Template Sequence |   |
T | P | L | V | A | E | G | A | R | V | A | E | G | T | E | V | A | R | V | R | G | P | L | R | . |
G | I | L | A | G | E | R | L | A | L | N |
Template Known Secondary structure |   |
 |  |
| S |
| T | T |
|  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
. | 100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|