 |
Job Description | P07650 | Confidence | 20.17% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 146 | Aligned Residues | 83 |
% Identity | 19% | Template | c1rr2A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:transcarboxylase 5s subunit; |
PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid
|
Resolution | 2.00 Å |
|
 |
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
Query Sequence |   |
M | T | M | P | E | R | V | S | L | T | M | A | M | R | D | S | G | T | . |
V | L | D | W | K | S | L | H | L | N | G | P | I | V | D | K | H | S | T | G | G | V | G | D | V | T | S | L | M | L | G | P | M | V | A | A | C | G | G | Y | I | P | M | I | S | G | R | G | L | G | H | T | G | G | . |
. |
. |
T | L | D | K |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |
|
|
|   |   |
| . | . | . |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . |   |
|   |
|
|
|   |
| . | . | . | . |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|   |
|
Template Sequence |   |
L | K | P | Q | P | A | Y | D | I | I | K | A | I | K | D | T | Y | G | Q | K | T | Q | I | N | . |
. |
. |
. |
. |
. |
. |
. |
L | H | C | H | S | T | T | G | . |
. |
. |
. |
V | T | E | V | S | L | M | K | A | I | E | A | G | V | D | V | V | D | T | A | I | S | S | M | S | L | G | P | G | H | N | P | T | E | S | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  | . | . | . | . | . | . | . | . |  |  |  | B |
| T | T | S | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | B |
| G | G | G |
| S | T | T | S | B |
| B |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 220 | . | |
|
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
  |   |
127 | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | S | I | . |
. |
P | G | F | D | I | F | P | D | D | N | R | F | R | E | I |
Query Conservation |   |
|
|   |
| . | . |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|
Template Sequence |   |
A | E | M | L | E | G | T | G | Y | T | T | N | L | D | Y | D | R | L | H | K | I |
Template Known Secondary structure |   |
 |  | T | T | T | T | T | T |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|