Return to main results Retrieve Phyre Job Id

Job DescriptionP75933
Confidence97.84%DateThu Jan 5 12:16:07 GMT 2012
Rank3Aligned Residues60
% Identity15%Templated1vlia1
SCOP infobeta-clip AFP III-like domain AFP III-like domain
Resolution2.38

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  VVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFR
Query Conservation 


 
 
  
  

  

         
      
    

  
 
 
  
  
    
 
Alig confidence 



























































Template Conservation 


  

  
  

  

  



 
  
  
    
 


    


   
 
   


Template Sequence  IFTTAPIQKGEAFSEDNIAVLRPGQKPQGLHPRFFELLTSGVRAVRDIPADTGIVWDDIL
Template Known Secondary structure  SS
B
TT
B

TTT

TTS


B
GGGTT
B
SS
B
TT
B

GGGTS
Template Predicted Secondary structure 

































Template SS confidence 



























































   306...310.........320.........330.........340.........350.........360.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions