Job Description P75933 Confidence 100.00% Date Thu Jan 5 12:16:07 GMT 2012 Rank 1 Aligned Residues 184 % Identity 18% Template c3frnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:flagellar protein flga; PDBTitle: crystal structure of flagellar protein flga from thermotoga maritima2 msb8 Resolution 2.05 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	S	Q	L	H	N	F	F	S	A	Q	L	A	G	V	S	D	E	V	R	V	S	I	R	T	A	P	N	L	L	P	P	C	E	Q	P	L	L	S	M	S	N	N	S	R	L	W	G	N	V	N	V	L	A	R	C	G	N	D	K	R	Y	L	Q	V	N	V	Q	A	T	G	N	Y	V	V	A	A	M
Query Conservation
Alig confidence																						.	.																													.
Template Conservation																						.	.																													.
Template Sequence		S	L	K	N	A	V	F	E	E	I	G	K	K	A	E	A	K	D	F	E	.	.	A	F	V	V	K	T	F	G	T	L	P	E	K	F	E	P	Q	T	I	R	V	T	K	I	S	K	N	L	.	F	S	V	F	L	R	F	P	D	T	Y	V	T	L	N	M	L	L	R	K	E	R	N	V	V	V	L	K	R
Template Known Secondary structure																			S			.	.												S	S				S									T	T		.								S	S																			S	S
Template Predicted Secondary structure																						.	.																													.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	A	R	G	G	K	L	E	A	G	N	V	K	L	K	R	G	R	L	D	T	L	P	P	R	T	V	L	D	I	N	Q	L	V	D	A	I	S	L	R	D	L	S	P	D	Q	P	I	Q	L	T	Q	F	R	Q	A	W	R	V	K	A	G	Q	R	V	N	V	I	A	S	G	D	G	F	S	A	N	A	E
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		N	I	N	V	G	D	V	I	K	E	E	D	V	R	L	E	K	R	N	V	F	E	I	Y	G	E	P	F	F	D	V	S	E	V	V	G	K	I	S	R	R	Y	L	K	E	G	T	V	L	T	A	D	M	V	K	D	P	P	D	V	V	K	G	Q	V	V	P	A	Y	.	.	.	.	.	.	.	V	T	T	F
Template Known Secondary structure			B		T	T		B			T	T	T								G	G	G		S	S		B		S						T	T				S	S		B		T	T		B		B	G	G	G						S	B		T	T							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.								.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	L	N	N	A	A	V	A	Q	N	A	R	V	R	M	V	S	G	Q	V	V	S	G	V	V	D	A	D	G	N	I	L	I
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		V	E	V	L	E	N	G	Y	L	G	E	T	V	R	A	M	N	.	S	R	K	Y	V	F	G	R	V	E	R	G	P	V	L	R	I
Template Known Secondary structure					S	S		B		T	T								.											T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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