Return to main results Retrieve Phyre Job Id

Job DescriptionP75933
Confidence8.66%DateThu Jan 5 12:16:07 GMT 2012
Rank75Aligned Residues21
% Identity14%Templatec3cw1Z_
PDB info PDB header:splicingChain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp
Resolution5.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.
Predicted Secondary structure 







Query SS confidence 




















Query Sequence  VAQNARVRMVSGQVVSGVVDA
Query Conservation   
  


 
 

 

 
 
  
Alig confidence 




















Template Conservation      
 
 
  
    
 
  
Template Sequence  TGKPVMVKLKWGMEYKGYLVS
Template Known Secondary structure  SS
TTS
Template Predicted Secondary structure 






Template SS confidence 




















   215....220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions