Job Description P75933 Confidence 9.09% Date Thu Jan 5 12:16:07 GMT 2012 Rank 72 Aligned Residues 51 % Identity 22% Template c1kxfA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:sindbis virus capsid protein; PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii) Resolution 2.38 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		R	Q	A	W	R	V	K	A	G	Q	R	V	N	V	I	A	S	G	D	G	F	S	A	N	A	E	G	Q	A	L	N	N	A	A	V	A	Q	N	A	R	V	R	M	.	V	S	G	Q	V	V	S	G	V	V	D	A	D	G
Query Conservation																																													.
Alig confidence																											.	.	.	.	.														.							.
Template Conservation																											.	.	.	.	.																					.
Template Sequence		E	H	P	E	G	F	Y	N	W	H	H	G	A	V	Q	Y	S	G	G	R	F	T	I	P	R	.	.	.	.	.	G	V	G	G	R	G	D	S	G	R	P	I	M	D	N	S	G	R	V	V	.	A	I	V	L	G	G	A
Template Known Secondary structure					S						T	T							T	T						T	.	.	.	.	.	T	S			T	T		T	T						T	T	S				.
Template Predicted Secondary structure																											.	.	.	.	.																					.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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