Job Description P30014 Confidence 97.81% Date Thu Jan 5 11:45:43 GMT 2012 Rank 40 Aligned Residues 153 % Identity 23% Template c3cymA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.																		.	.
Query SS confidence																				.																		.	.
Query Sequence		M	S	D	N	A	Q	L	T	G	L	C	D	R	F	R	G	F	Y	.	P	V	V	I	D	V	E	T	A	G	F	N	A	K	T	D	A	.	.	L	L	E	I	A	A	I	T	L	K	M	D	E	Q	G	W	L	M	P	D	T	T	L	H	F	H	V	E	P	F	V	G	A	N	L	Q	P	E	A	L	A	F
Query Conservation																				.																		.	.
Alig confidence																				.																		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	T	L	P	A	F	R	D	Y	C	S	E	L	A	S	S	H	G	S	L	A	A	D	A	E	R	A	S	G	F	R	Y	G	H	E	D	W	L	V	Q	F	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	A	G	I	G	L	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S													S													T	T	T	S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.														.	.	.	.	.	.	.	70	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	I	D	P	N	D	P	D	R	G	A	V	S	E	Y	E	A	L	H	E	I	F	K	V	V	R	K	G	I	K	A	S	G	C	N	R	A	I	M	V	A	H	N	A	N	F	D	H	S	F	M	M	A	A	A	E	R	A	S	L	K	R	N	P	F	H	P	F	A	T	F	D	T	A	A	L	A	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	Q	A	L	A	A	A	G	A	D	W	N	D	F	N	R	A	V	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	V	W	I	L	H	D	S	L	Q	D	L	P	G	F	D	E	.	.	.	.	.	.	L	G	M	E	P	Q	R	L	F	D	T	E	I	A	A	R	L	L	G	L
Template Known Secondary structure		.	.	.	.	.	.						T	T											.	.	.	.	.	.	.	.	.	.	.	.	T	T						S	S											.	.	.	.	.	.		T																T	T
Template Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
								73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.																.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	G	Q	T	V	L	S	K	A	C	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	D	F	D	S	T	Q	A	H	S	A	L	Y	D	T	E	R	T	A	V	L	F	C	E	I	V	N	R	W	K	R	L	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		K	.	.	R	F	G	L	A	A	V	T	E	H	F	L	G	L	T	L	A	K	E	H	S	A	A	D	W	S	Y	R	P	L	P	R	D	W	R	N	Y	A	A	L	D	V	E	L	L	I	E	L	E	T	K	M	R	A	E	L	K	R	Q	G
Template Known Secondary structure		S	.	.	S		S																		T	T			T	T		S	S															T																T
Template Predicted Secondary structure			.	.
Template SS confidence
		129			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions