40 c3cymA_ Probab=97.81   E-value=0.00078  Score=38.67  Aligned_columns=153  Identities=23%

Q ss_pred             CCCHHHHHHHHHHCCCCC-EEEEEECCCCCCCCCCE--EEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHHHHHH
Q ss_conf             985245667763104773-09999337988887776--899999999638884487645688873268898798989988
Q batch____         1 MSDNAQLTGLCDRFRGFY-PVVIDVETAGFNAKTDA--LLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAF   77 (215)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~-~VviD~ETTGl~~~~~~--IieigaV~~~~~~~g~i~~~~~~~~~v~p~~~~~i~~~~~~i   77 (215)
                      +.....+-.++..++... +|.||||+.+......+  +|||+.             .......+.|             
T Consensus        16 I~t~~~l~~~~~~L~~~~~~ia~DtE~~~~~~~~~~~~LiQi~~-------------~~~~~~liD~-------------   69 (415)
T c3cymA_          16 IDTLPAFRDYCSELASSHGSLAADAERASGFRYGHEDWLVQFKR-------------DGAGIGLLDP-------------   69 (415)
T ss_dssp             ECSHHHHHHHHHHHHSCEEEEEEEEEECTTTSSSCCEEEEEEEE-------------ETTEEEEECH-------------
T ss_pred             ECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEE-------------CCCCEEEEEC-------------
T ss_conf             67989999999999617996999747778856388759999745-------------7985589951-------------


Q ss_pred             HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             57998898627998799999999999998641247886899964788899999999981899875540116889999730
Q batch____        78 NGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGL  157 (215)
Q Consensus        78 ~gI~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~hn~~fD~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (215)
                            .-..........+...+            .+...|+|++.+|..+|..      ....+.+.+++.........
T Consensus        70 ------l~~~~~~~~~~~L~~~l------------~~i~KV~h~~~~Dl~~L~~------~g~~~~~~fDTqiaa~~lg~  125 (415)
T c3cymA_          70 ------QALAAAGADWNDFNRAV------------GDAVWILHDSLQDLPGFDE------LGMEPQRLFDTEIAARLLGL  125 (415)
T ss_dssp             ------HHHHHTTCCHHHHHHHH------------TTCEEEESSHHHHHHHHHH------HTCCCCEEEEHHHHHHHTTC
T ss_pred             ------CCCCCCHHHHHHHHHHH------------CCCCEEEEECHHHHHHHHH------CCCCCCCEEEHHHHHHHCCC
T ss_conf             ------23777066799988763------------4893999530788999997------49820662338999987078


Q ss_pred             CCCCCCHHHHHHHC---------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             13689989999980---------------8899987888958999999999999999988578
Q batch____       158 ALGQTVLSKACQTA---------------GMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLG  205 (215)
Q Consensus       158 ~~~~~~l~~l~~~~---------------gi~~~~~~aH~Al~DA~~ta~l~~~l~~~~~~~~  205 (215)
                      .  ..++..+++.+               .-|++..+.+=|..|+.....|+.+|.++++..+
T Consensus       126 ~--~~gl~~l~~~~l~~~l~K~~~~sdW~~RPLs~~ql~YAa~Dv~~Ll~l~~~l~~~L~~~g  186 (415)
T c3cymA_         126 K--RFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQG  186 (415)
T ss_dssp             S--SCSHHHHHHHHHCEECCCCCTTCCTTCSSCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             C--CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             8--889899999980860772341534313899989999999549999999999999999749