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Job Description | P0ADM8 | Confidence | 4.38% | Date | Thu Jan 5 11:21:23 GMT 2012 |
Rank | 94 | Aligned Residues | 92 |
% Identity | 15% | Template | c2dq0A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:seryl-trna synthetase; |
PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog
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Resolution | 2.60 Å |
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121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
H | T | F | S | S | N | E | S | L | W | I | S | K | Q | N | D | P | N | E | A | R | A | Q | L | I | T | L | R | R | S | V | L | K | L | T | G | D | V | L | N | D | D | P | R | D | L | Q | L | L | P | I | A | G | R | L | K | C | A | H | V | N | H | V | E | A | L | C | D | . |
A | E | D | V | L | . |
V | W | S | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | Q | F | H | K | V | E | Q | F | V | Y | S | R | P | E | E | S | W | E | W | H | E | K | I | I | R | N | A | E | E | L | F | Q | E | L | E | I | . |
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P | Y | R | V | V | N | I | C | T | G | D | L | G | Y | V | A | A | K | K | Y | D | I | E | A | W | M | P | G | Q | G | K | F | R | E | V | V | S | A | S |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | T | P | T | I | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | C | T | D | W | Q | A | R | R | L | N | I | R | F | R | D | R | T | D | E |
Template Known Secondary structure |   |
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| T | T | T | T |  |  |  |  | T |  |  |  |  | S | S | T | T | S |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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