Job Description P77328 Confidence 5.84% Date Thu Jan 5 12:27:47 GMT 2012 Rank 50 Aligned Residues 112 % Identity 13% Template c3s0xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:peptidase a24b, flak domain protein; PDBTitle: the crystal structure of gxgd membrane protease flak Resolution 3.60 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	G	D	Y	T	R	R	S	F	I	Y	G	S	V	I	C	L	L	V	A	L	V	P	A	L	T	R	L	F	C	S	I	P	L	P	V	S	S	A	V	M	L	V	S	Y	L	P	L	L	F	S	A	L	V	F	S	Q	Q	I	T	F	T	A	R	N	I	Y	R	L	A	L	P	L	F	V	G	I	F	L
Query Conservation
Alig confidence																								.	.	.																																		.												.	.	.	.	.
Template Conservation																								.	.	.																																		.												.	.	.	.	.
Template Sequence		R	S	R	E	I	E	D	Y	I	W	I	F	L	A	V	F	G	V	L	F	A	I	.	.	.	Y	S	S	I	T	L	L	D	Y	S	I	L	I	N	S	I	S	G	F	V	I	C	F	I	L	G	Y	X	X	F	L	S	G	.	I	G	G	G	D	G	K	X	L	I	G	.	.	.	.	.	L	G	A	L	V
Template Known Secondary structure					S																			.	.	.									S																							T	T	.	S											.	.	.	.	.			T	T	S
Template Predicted Secondary structure																								.	.	.																																		.												.	.	.	.	.
Template SS confidence
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.				.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.		.	.	.	.	.	580	.	.	.	.	.						.	.	.	.	590
		391	.	.	.	.	.	.	.	.	400										.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		M	A	L	P	P	V	Y	L	Q	D	.	.	.	.	.	.	.	.	.	L	P	L	T	L	R	P	L	L	S	N	G	L	L	V	G	I	L	.	.	L	A	V	L	M	D	N	L	I	P	W	E	R
Query Conservation												.	.	.	.	.	.	.	.	.																			.	.
Alig confidence												.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		P	K	F	Q	X	P	I	Y	T	S	L	G	T	L	L	N	L	N	Y	V	P	T	F	P	I	X	V	F	I	N	G	I	F	F	X	V	F	L	P	F	V	I	L	F	R	N	I	L	N	G	A	R
Template Known Secondary structure		S	S							S						T		S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions