Job Description P77328 Confidence 5.16% Date Thu Jan 5 12:27:47 GMT 2012 Rank 77 Aligned Residues 121 % Identity 11% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	P	T	L	L	S	A	F	Q	L	P	Q	S	S	L	L	T	L	T	Q	Y	A	F	L	A	T	A	L	A	C	F	A	Q	A	F	C	G	H	R	R	A	I	M	E	G	P	G	G	L	W	W	G	T	I	L	T	I	T	L	G	E	A	S	R	G	T	P	I	N	D	I	A	T	S	L	A	V	G	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	P	S	L	L	A	T	F	T	F	G	P	V	A	.	.	.	.	.	.	.	.	G	I	I	V	A	L	V	K	N	L	L	N	Y	L	F	S	M	G	D	P	V	G	P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T
Template Known Secondary structure									T	T	S					.	.	.	.	.	.	.	.																T	T	T		S	S																					S	S	S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		A	L	S	G	V	L	T	M	L	I	G	F	S	G	L	.	.	.	.	.	.	.	G	H	R	L	A	R	L	F	T	P	S	V	M	V	L	F	M	L	M	L	G	A	Q	L	T	T	I	F	F	K	G	M	L	G
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L	Y	R	R	L	A	N	F	L	K
Template Known Secondary structure													T	T	T	T	T																																		T	T					T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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