Job Description P77328 Confidence 23.73% Date Thu Jan 5 12:27:47 GMT 2012 Rank 3 Aligned Residues 168 % Identity 14% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		262	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.
Predicted Secondary structure											.	.	.	.	.																																																																.
Query SS confidence											.	.	.	.	.																																																																.
Query Sequence		G	T	D	V	F	Y	P	Q	Q	.	.	.	.	.	G	A	G	N	T	R	Y	R	R	S	F	V	A	T	G	F	M	T	L	I	T	V	P	L	A	V	I	P	F	S	P	F	V	S	S	I	G	L	L	T	Q	T	G	D	Y	T	R	R	S	F	I	Y	G	S	V	I	C	L	L	V	A	L	V	.	P	A
Query Conservation											.	.	.	.	.																																																																.
Alig confidence											.	.	.	.	.																																																																.
Template Conservation
Template Sequence		I	I	A	H	Q	F	Y	R	L	G	V	F	K	E	L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S
Template Known Secondary structure								T	T	S	T	T	T	T					S																					T													T		S	S			T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																									.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	R	L	F	C	S	I	P	L	P	V	S	S	A	V	M	L	V	S	Y	L	P	L	L	F	S	A	L	V	F	S	Q	Q	I	T	F	T	A	.	R	N	I	Y	R	L	A	L	P	L	F	V	G	I	F	L	M	A	L	P	P	V	Y	L	Q	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	Q	T	L	L	Y	A	I	L	G	A	L	M	G	V	L	G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P	F	P	R	A	T	I	N	D	L	F	K	A	V	T	E	L	I	L	M	P	I	I
Template Known Secondary structure			S		T																														S	S	S	T	T			T															T	T	T											S					S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
																	403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	L	R	P	L	L	S	N	G	L	L	V	G	I	L	L	A	V	L	M	D	N	L	I	P	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	I	L	V	A	L	S	I	G	L	P	L	P	A	G	V	F	V	P	S	F	L	I	G	A	G	F	G	R	L	Y	G	E	L	M	R	V	V	F	G	N
Template Known Secondary structure										T	T	S	S	S	B		B																										T
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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