Job Description P77328 Confidence 9.72% Date Thu Jan 5 12:27:47 GMT 2012 Rank 13 Aligned Residues 164 % Identity 9% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																								.	.																																				.	.	.	.	.
Query SS confidence																																								.	.																																				.	.	.	.	.
Query Sequence		I	R	G	T	D	V	F	Y	P	Q	Q	G	A	G	N	T	R	Y	R	R	S	F	V	A	T	G	F	M	T	L	I	T	V	P	L	A	V	I	.	.	P	F	S	P	F	V	S	S	I	G	L	L	T	Q	T	G	D	Y	T	R	R	S	F	I	Y	G	S	V	I	C	L	L	V	A	L	.	.	.	.	.
Query Conservation																																								.	.																																				.	.	.	.	.
Alig confidence																																								.	.																																				.	.	.	.	.
Template Conservation
Template Sequence		G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E	A	R	H	T	L	L	A	T	G	A	A	A	G	L	A	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E
Template Known Secondary structure												T	T			S																					T										T	T	T	T	S		S	S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
												333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	V	P	A	L	T	R	L	F	C	S	I	P	L	P	V	S	S	A	V	M	L	V	S	Y	L	P	L	L	F	S	A	L	V	F	S	Q	Q	I	T	F	T	A	.	.	R	N	I	Y	R	L	A	L	P	L	F	V	G	I	F	L	M	A	L	P	P	V	Y	L	Q	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation
Template Sequence		V	A	L	I	D	V	G	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G	P	I	F	N	K	W	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K	W	V	L	M	G	G	A	I	G	G	L	C	G	L	L	G	F	V	A	P	A	T	S	G	G
Template Known Secondary structure				S											G	G	G																																T	T	T	T																								G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	T	L	R	P	L	L	S	N	G	L	L	V	G	I	L	L	A	V	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	N	L	I	P	I	A	T	A	G	N	F	S	M	G	M	L	V	F	I	F	V
Template Known Secondary structure		S	T	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions