Return to main results Retrieve Phyre Job Id

Job DescriptionP77328
Confidence11.09%DateThu Jan 5 12:27:47 GMT 2012
Rank9Aligned Residues68
% Identity12%Templatec2d4vD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of nad dependent isocitrate dehydrogenase2 from acidithiobacillus thiooxidans
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280.........290.........300.... .....310.........320.......
Predicted Secondary structure 










.............



Query SS confidence 











































. . . . . . . . . . . . .






















Query Sequence  RGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVS. . . . . . . . . . . . . SIGLLTQTGDYTRRSFIYGSVIC
Query Conservation                    


 
 

 


 



  
      .............       

  

          
Alig confidence 











































.............






















Template Conservation 
 
  

  
  




  











 
 












  















 



 
 


 


Template Sequence  NFLQQILLRPEDYSVVATLNLNGDYVSDALAAEVGGIGMAPGANLSDTHAIFEATHGTAPDIAGQGKANPSSLILSAVMM
Template Known Secondary structure 
GGG


TT
GGG



SS

S



TTTTTTT



Template Predicted Secondary structure 





































Template SS confidence 















































































   297..300.........310.........320.........330.........340.........350.........360.........370......
 
   328
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   377
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions