 |
Job Description | P0AF10 | Confidence | 2.43% | Date | Thu Jan 5 11:24:51 GMT 2012 |
Rank | 80 | Aligned Residues | 41 |
% Identity | 10% | Template | d1mnmc_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | 2.25 |
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | V | L | Q | V | F | R | K | D | D | Y | A | V | K | Y | A | V | E | P | L | L | D | G | D | G | P | L | G | D | L | S | V | R | L | K | L | I | Y | G | L | G | V | I | N | R | Q | E | Y | E | D | A | E | L | L | M | A | L | R | E | E | L | N | H |
Query Conservation |   |
  |
|
|   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
R | I | L | E | S | W | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | N | I | E | N | P | Y | L | D | T | K | G | L | E | N | L | M | K | N | T | S | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | R | I | Q | I | K | N | W | V | S | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|