Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF10
Confidence2.43%DateThu Jan 5 11:24:51 GMT 2012
Rank81Aligned Residues21
% Identity19%Templatec2imuA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:structural polyprotein (pp) p1; PDBTitle: nmr structure of pep46 from the infectious bursal disease2 virus (ibdv) in dodecylphosphocholin (dpc).
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80........
Predicted Secondary structure 











Query SS confidence 



























Query Sequence  VLQVFRKDDYAVKYAVEPLLDGDGPLGD
Query Conservation 
   
  

 


  

 

   




Alig confidence 






.......













Template Conservation 






.......













Template Sequence  IRRIAVP. . . . . . . VVSTLFPPAAPLAH
Template Known Secondary structure  S.......
SSTT
Template Predicted Secondary structure  .......


Template SS confidence 



























   10...... ...20.........30
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions