Job Description P24082 Confidence 7.53% Date Thu Jan 5 11:40:43 GMT 2012 Rank 92 Aligned Residues 131 % Identity 17% Template c3n2bD_ PDB info PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. Resolution 1.80 Å

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		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.						.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																							.	.																															.	.	.	.	.
Query SS confidence																							.	.																															.	.	.	.	.
Query Sequence		Q	D	I	G	L	A	K	C	S	S	D	E	K	A	L	A	K	A	K	S	N	.	.	K	L	T	V	S	V	G	E	F	C	S	K	K	V	L	G	V	C	L	E	K	K	R	S	Y	C	Q	F	D	S	.	.	.	.	.	K	L	A	Q	I	V	Q	Q	Q	G	R	N	G	Q	L	R	I	S	F	G	S	A
Query Conservation																							.	.																															.	.	.	.	.
Alig confidence																							.	.																															.	.	.	.	.
Template Conservation
Template Sequence		L	G	S	G	F	D	I	V	S	V	G	E	L	E	R	V	L	A	A	G	G	D	P	S	K	V	V	F	S	G	V	G	K	T	E	A	E	M	K	R	A	L	Q	L	K	I	K	C	F	N	V	E	S	E	P	E	L	Q	R	L	N	K	V	A	G	E	L	G	V	K	A	P	I	S	L	R	I	N	P	D
Template Known Secondary structure		T	T						S	S										T	T			G	G	G						T	T												T	T		S						S															T									B
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		544	.	.	.	.	.													550	.	.	.	.	.	.	.	.	.						560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		K	H	P	D	C	R	.	.	.	.	.	.	.	.	.	.	.	.	G	I	T	V	D	E	L	Q	K	I	.	.	.	.	.	Q	F	N	R	L	D	F	T	N	F	Y	E	D	L	M	N	N	Q	K	I	P	D	S	G	V	L	T	Q	K	V	K	E	Q	I	A	D	Q	L	K	Q	A	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		V	D	A	K	T	H	P	Y	I	S	T	G	L	R	D	N	K	F	G	I	T	F	D	R	A	A	Q	V	Y	R	L	A	H	S	L	P	N	L	D	V	H	G	I	D	C	H	I	G	S	Q	L	T	A	L	A	P	F	I	D	A	T	D	R	L	L	A	L	I	D	S	L	K	A	E	G
Template Known Secondary structure				T	T	T											S	S		S	B		G	G	G											S	T	T																S																					T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions