Job Description P24082 Confidence 13.92% Date Thu Jan 5 11:40:43 GMT 2012 Rank 55 Aligned Residues 45 % Identity 11% Template c2xgvA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:psiv capsid n-terminal domain; PDBTitle: structure of the n-terminal domain of capsid protein from2 rabbit endogenous lentivirus (relik) Resolution 2.00 Å

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		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.				.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		R	G	I	T	V	D	E	L	Q	K	I	Q	F	N	R	L	D	F	.	.	.	T	N	F	Y	E	D	L	M	N	N	Q	K	I	P	D	S	G	V	L	T	Q	K	V	K	E	Q	I	A	D	Q
Query Conservation																				.	.	.
Alig confidence													.							.	.	.											.	.
Template Conservation													.																				.	.
Template Sequence		K	G	L	T	S	P	E	T	I	T	Y	.	W	G	L	I	S	Q	D	L	S	S	R	E	Q	V	Q	L	L	E	V	.	.	V	P	G	L	Q	A	D	K	D	M	L	G	A	Y	L	E	E	R
Template Known Secondary structure			T	T	T	S							.					T	T	T													.	.			S
Template Predicted Secondary structure													.																				.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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