Job Description P77658 Confidence 56.18% Date Thu Jan 5 12:31:27 GMT 2012 Rank 50 Aligned Residues 258 % Identity 7% Template c3r6nA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:desmoplakin; PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain Resolution 2.95 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		E	D	E	K	N	A	L	A	K	L	K	A	A	I	D	P	V	G	A	A	I	D	T	V	G	.	.	R	R	Y	S	E	L	K	K	F	F	D	K	G	L	I	D	K	E	E	Y	E	F	L	V	R	K	L	N	E	T	T	E	E	L	S	G	V	A	Q	A	Q	R	E	A	E	K	A	G	K	L	A	A	A
Query Conservation																											.	.
Alig confidence																											.	.																																							.
Template Conservation																																																																			.
Template Sequence		E	F	T	K	H	V	T	S	E	C	L	G	W	M	R	Q	Q	R	A	E	M	D	M	V	A	W	G	V	D	L	A	S	V	E	Q	H	I	N	S	H	R	G	I	H	N	S	I	G	D	Y	R	W	Q	L	D	K	I	K	A	D	L	R	E	K	S	.	A	I	Y	Q	L	E	E	E	Y	E	N	L	L	K
Template Known Secondary structure																						T	T	S																																											.
Template Predicted Secondary structure																																																																			.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	E	A	Q	A	Q	A	F	Q	R	M	L	D	K	I	D	P	L	A	A	A	L	R	N	L	E	Q	Q	H	D	E	L	N	A	A	F	A	S	G	K	I	N	G	S	Q	F	E	N	Y	S	R	K	I	Q	E	T	R	R	E	L	T	G	E	A	Q	A	E	R	E	A	A	K	A	H	D	E	Q	V	V
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		A	S	F	E	R	M	D	H	L	R	Q	L	Q	N	I	I	Q	A	T	S	R	E	I	M	W	I	N	D	C	E	E	E	E	L	L	.	.	Y	D	W	S	D	K	N	T	N	I	A	Q	K	Q	E	A	F	S	I	R	M	S	Q	L	E	V	K	E	K	E	L	N	K	L	K	Q	E	S	D	Q	L	V	L
Template Known Secondary structure																																				S	.	.				S	T	T				T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	L	Q	R	L	I	A	Q	L	D	P	.	V	G	T	A	F	N	R	L	V	E	Q	Q	K	Q	L	N	E	A	K	A	K	G	M	L	S	P	E	M	Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	V	T	Q	S	Q	L	S	K	T	G	M	S	A	K	Q	T	A	F	A	M	R	M	L	P
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		N	Q	H	P	A	S	D	K	I	E	A	Y	M	D	T	L	Q	T	Q	W	S	W	I	L	Q	I	T	K	C	I	D	V	H	L	K	E	N	A	A	Y	F	Q	F	F	E	E	A	Q	S	T	E	A	Y	L	K	G	L	Q	D	S	I	R	K	K	Y	P	C	D	K	N	M	P	L	Q	H	L	L	E	Q	I
Template Known Secondary structure		T	T		T	T																																																												S				T	T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	M	T	D	I	V	V	G	L	S	T	G	Q	S	P	F	M	V	L	M	Q	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	E	K	E	R	E	K	I	L	E	Y	K	R	Q	V	Q	N	L	V	N	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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