Job Description P77658 Confidence 87.92% Date Thu Jan 5 12:31:27 GMT 2012 Rank 29 Aligned Residues 111 % Identity 9% Template c2v66C_ PDB info PDB header:structural protein Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	N	A	D	N	L	T	S	S	L	V	K	M	T	Q	A	G	E	T	A	A	N	S	A	G	K	V	T	K	A	T	E	D	E	K	N	A	L	A	K	L	K	A	A	I	D	P	V	G	A	A	I	D	T	V	G	R	R	Y	S	E	L	K	K	F	F	D	K	G	L	I	D	K	E	E	Y	E	F
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		A	E	Q	R	N	R	D	L	Q	A	D	N	Q	R	L	K	Y	E	V	E	A	L	.	.	.	K	E	K	L	E	H	Q	Y	A	Q	S	Y	K	Q	V	S	V	L	E	D	D	L	S	Q	T	R	A	I	K	E	Q	L	H	K	Y	V	R	E	L	E	Q	A	N	D	D	L	E	R	A	K	R	A	T	I	V
Template Known Secondary structure																								.	.	.
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	K	L	N	E	T	T	E	E	L	S	G	V	A	Q	A	Q	R	E	A	E	K	A	G	K	L	A	A	A	Q	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	D	F	E	Q	R	L	N	Q	A	I	E	R	N	A	F	L	E	S	E	L	D	E	K	E	S	L	L	V	S	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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