Job Description P77658 Confidence 15.35% Date Thu Jan 5 12:31:27 GMT 2012 Rank 79 Aligned Residues 77 % Identity 12% Template c2ke4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4 Resolution UNK

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		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		N	R	L	V	E	Q	Q	K	Q	L	N	E	A	K	A	K	G	M	L	S	P	E	M	Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	.	.	.	.	.	V	T	Q	S	Q	L	S	K	T	G	M	S	A	K	Q	T	A	F	A	M	R	M	L	P	A	Q	M	T	D	I	V	V	G	L	S	T
Query Conservation																																									.	.	.	.	.
Alig confidence																																									.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	R	K	R	L	Q	Q	Q	L	E	E	R	S	R	E	L	Q	K	E	V	D	Q	R	E	A	L	K	K	M	K	D	V	Y	E	K	T	P	Q	M	G	D	P	A	S	L	E	P	Q	I	A	E	T	L	S	N	I	E	R	L	K	L	E	V	Q	K	Y	E	A	W	L	A	E	A	E	S	R	V	L	S
Template Known Secondary structure																										T													G	G	G			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		299	300
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		422	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions