Job Description P77658 Confidence 43.94% Date Thu Jan 5 12:31:27 GMT 2012 Rank 53 Aligned Residues 84 % Identity 12% Template c2eqbC_ PDB info PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex Resolution 2.70 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	G	M	L	S	P	E	M	Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	V	T	Q	S	Q	L	S	K	T	G	M	S	A	K	Q	T	A	F	A	M	R	M	L	P	A	Q	M	T	D	I	V	V	G	L	.	S	T	G	Q	S	P	F	M	V	L	M	Q	Q	G	G	H	S	A	M	Q	E
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		N	Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A	E	E	E	A	D	K	L	N	K	E	V	E	D	L	T	A	S	L	F	D	E	A	N	N	M	V	A	D	A	R	K	E	K	Y	A	I	E	I	L	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		318	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	I	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	L	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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