 |
Job Description | P77658 | Confidence | 8.68% | Date | Thu Jan 5 12:31:27 GMT 2012 |
Rank | 96 | Aligned Residues | 37 |
% Identity | 11% | Template | c2e43A_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; |
PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment
|
Resolution | 2.10 Å |
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | N | A | D | N | L | T | S | S | L | V | K | M | T | Q | A | G | E | T | A | A | N | S | A | G | K | V | T | K | A | T | E | D | E | K | N |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
Template Sequence |   |
K | M | R | N | L | E | T | Q | H | K | V | L | E | L | T | A | E | N | E | R | L | Q | K | K | V | E | Q | L | S | R | E | L | S | T | L | R | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|