Job Description P77658 Confidence 15.49% Date Thu Jan 5 12:31:27 GMT 2012 Rank 76 Aligned Residues 253 % Identity 9% Template c2bsgA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:fibritin; PDBTitle: the modeled structure of fibritin (gpwac) of bacteriophage2 t4 based on cryo-em reconstruction of the extended tail of3 bacteriophage t4 Resolution 15.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																						.	.	.																																					.	.	.	.	.
Query SS confidence																																						.	.	.																																					.	.	.	.	.
Query Sequence		D	S	T	G	A	K	N	N	A	D	N	L	T	S	S	L	V	K	M	T	Q	A	G	E	T	A	A	N	S	A	G	K	V	T	K	A	.	.	.	T	E	D	E	K	N	A	L	A	K	L	K	A	A	I	D	P	V	G	A	A	I	D	T	V	G	R	R	Y	S	E	L	K	K	F	F	.	.	.	.	.
Query Conservation																																						.	.	.																																					.	.	.	.	.
Alig confidence																																						.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		P	T	V	S	V	L	R	N	V	E	V	L	D	K	N	I	G	I	L	K	T	S	L	E	T	A	N	S	D	I	K	T	I	Q	I	N	K	K	D	I	S	D	L	K	T	L	T	S	E	H	T	E	I	L	N	G	T	N	N	T	V	D	S	I	L	A	D	I	I	R	N	D	L	L	W	I	K	R	E	L
Template Known Secondary structure								T	T	T	T																								S	S														T	T														T	T	S							T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
											85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	K	G	L	I	D	K	E	E	Y	E	F	L	V	R	K	L	N	E	T	T	E	E	L	S	G	V	A	Q	A	Q	R	E	A	E	K	A	G	K	L	A	A	A	Q	Q	E	A	Q	A	Q	A	F	Q	R	M	L	D	K	I	D	P	L	A	A	A	L	R	N	L	E	Q
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	H	R	I	I	N	N	T	D	V	I	T	S	Q	G	I	R	L	S	L	T	I	E	V	G	N	L	R	E	E	L	V	Y	S	R	L	N	E	I	D	T	K	Q	T	T	V	E	S	D	I	S	A	I	K	T	S	I	S	I	I	T	S	V	N	T	N	T	D	N	I	A	S	I	N	L	E	I	K	Q
Template Known Secondary structure				S	T	T	T	T								T	T	S					T	T	T						T	T			T	T	T														T					T	S	S	S		S													T	T	T	T	B	S	B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.												.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																		.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	H	D	E	L	N	A	A	F	A	S	G	K	I	N	G	S	Q	F	E	N	Y	S	R	K	I	Q	E	T	R	R	E	.	.	L	T	G	E	A	Q	A	E	R	E	A	A	K	A	H	D	.	.	.	.	.	.	.	.	.	.	.	E	Q	V	V	A	L	Q	R	L	I	A	Q	L	D	P	V	G	T	A
Query Conservation																																		.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	V	I	E	T	S	I	I	K	G	Q	I	K	D	N	T	T	S	I	L	R	A	N	V	S	W	L	N	Q	I	V	S	L	L	N	R	V	S	T	I	E	T	S	V	S	G	L	N	N	A	V	Q	N	L	Q	V	E	I	G	N	N	S	A	G	I	K	G	Q	V	V	A	L	N	T	L	V	N	G
Template Known Secondary structure								S	T	T		B										S		S	T	B	T	T					T	T	B												S	T	T	T	B	T	T	T	T	T					B		B	S	B		S														B
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		223	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		F	N	.	.	.	.	.	.	R	L	V	E	Q	Q	K	Q	L	N	E	A	K	A	K	G	M	L	S	P	E	M	Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	V	T	Q
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	P	N	G	S	T	V	E	E	R	G	L	T	N	S	I	K	A	N	E	T	N	I	A	S	V	T	Q	E	V	N	T	A	K	G	N	I	S	S	L	Q	G	D	V	Q	A	L	Q
Template Known Secondary structure		S	S	S	S	B	B					T	B
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions