Return to main results Retrieve Phyre Job Id

Job DescriptionP77658
Confidence94.54%DateThu Jan 5 12:31:27 GMT 2012
Rank12Aligned Residues131
% Identity9%Templatec2b9cA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:striated-muscle alpha tropomyosin; PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  AKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAIDTVGRRYSELKKFFDKGLIDKEEYEF
Query Conservation   
     
   
  
             
      
      
      
             
      
      
  
Alig confidence 
































































...











Template Conservation   
  
      
        
       

            
                      ...            
Template Sequence  AQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVA. . . RKLVIIESDLER
Template Known Secondary structure  GGTTTTT...
Template Predicted Secondary structure  ...
Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160...... ...170........
 
   97..100.........110.........120.........130.........140.........150
Predicted Secondary structure 
Query SS confidence 





















































Query Sequence  LVRKLNETTEELSGVAQAQREAEKAGKLAAAQQEAQAQAFQRMLDKIDPLAAAL
Query Conservation                                         
              
Alig confidence 





















































Template Conservation                
             

     
         

  
   
Template Sequence  AEERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVARLKKLV
Template Known Secondary structure  TTTTTTS



Template Predicted Secondary structure 
Template SS confidence 





















































   179180.........190.........200.........210.........220.........230..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions