Job Description P77658 Confidence 9.12% Date Thu Jan 5 12:31:27 GMT 2012 Rank 93 Aligned Residues 278 % Identity 12% Template c1u4qB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15, 16 and 17 of chicken brain2 alpha spectrin Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	I	D	S	T	G	A	K	N	N	A	D	N	L	T	S	S	L	V	K	M	T	Q	A	G	E	T	A	A	N	S	A	G	K	V	T	K	A	T	E	D	E	K	N	A	L	A	K	L	K	A	A	I	D	P	V	G	A	A	I	D	T	V	G	R	R	Y	S	E	L	K	K	F	F	D	K	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L	K	K	H	Q	L	L	E	A	D	I	S	A	H	E	D	R	L	K	D	L	N	S	Q	A	D	S	L	M	T	S	S	A	F	D	T	S	Q	V	K	D	K	R	E	T	I	N	G	R	F	Q	R	I	K	S	M	A	A	A	R	R	A	K	L	N	E	S	H	R	L	H	Q	F	F	R	D	M	D
Template Known Secondary structure																																	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	E	E	Y	E	F	L	V	R	K	L	N	E	T	T	E	E	L	S	G	V	A	Q	A	Q	R	E	A	E	K	A	G	K	L	A	A	A	Q	Q	E	A	Q	A	Q	A	F	Q	R	M	L	D	K	I	D	P	L	A	A	A	L	R	N	L	E	Q	Q	H	D	E	L	N	A	A	F	A	S	G	K
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		D	E	E	S	W	I	K	E	K	K	L	L	V	S	S	E	.	.	D	Y	G	R	D	L	T	G	V	Q	N	L	R	K	K	H	K	R	L	E	A	E	L	A	A	H	E	P	A	I	Q	G	V	L	D	T	G	K	K	L	S	D	D	N	T	I	G	K	E	E	I	Q	Q	R	L	A	Q	F	V	D	H	W
Template Known Secondary structure														T	T			.	.				S	S																																					T	T			S
Template Predicted Secondary structure																		.	.
Template SS confidence
		1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.			.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		I	N	G	S	Q	F	E	N	Y	S	R	K	I	Q	E	T	R	R	E	L	T	G	E	A	Q	A	E	R	E	A	A	K	A	H	D	E	Q	V	V	A	L	Q	R	L	I	.	.	A	Q	L	D	P	V	G	T	A	F	N	R	L	V	E	Q	Q	K	Q	L	N	E	A	K	A	K	G	M	L	S	P	E	M
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		K	E	L	K	Q	L	A	A	A	R	G	Q	R	L	E	E	S	L	E	Y	Q	Q	F	V	A	N	V	E	E	E	E	A	W	I	N	E	K	M	T	L	V	A	S	E	D	Y	G	D	T	L	A	A	I	Q	G	L	L	K	K	H	E	A	F	E	T	D	F	T	V	H	K	D	R	V	N	D	V	C	A	N
Template Known Secondary structure																																										T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		1858	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	V	T	Q	S	Q	L	S	K	T	G	M	S	A	K	Q	T	A	F	A	M	R	M	L	P	A	Q	M	T	D
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		G	E	D	L	.	.	.	I	K	K	N	N	H	H	V	E	N	I	T	A	K	M	K	G	L	K	G	K	V	S	D	L	E	K	A	A	A	Q	R	K	A	K	L	D	E
Template Known Secondary structure						.	.	.			T	T		S	T					T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		1938	.	1940	.				.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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