Job Description P77658 Confidence 7.78% Date Thu Jan 5 12:31:27 GMT 2012 Rank 100 Aligned Residues 81 % Identity 10% Template c1jsdB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:haemagglutinin (ha2 chain); PDBTitle: crystal structure of swine h9 haemagglutinin Resolution 1.80 Å

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		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	M	Y	E	E	L	S	G	K	L	R	A	M	R	S	E	L	E	V	T	Q	S	Q	L	S	K	T	G	M	S	A	K	Q	T	A	F	A	M	R	M	L	P	A	Q	M	T	D	I	V	V	G	L	S	T	G	Q	S	P	F	M	V	L	M	Q	Q	G	G	H	S	A	M	Q	E	T	R	I	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	S	T	Q	K	A	I	D	K	I	T	S	K	V	N	N	I	V	D	K	M	N	K	Q	Y	G	I	I	D	H	E	F	S	E	I	E	T	R	L	N	M	I	N	N	K	I	D	D	Q	I	Q	D	I	W	T	Y	N	A	E	L	L	V	L	L	E	N	Q	K	T	L	D	E	H	D	A	N	V	N	N
Template Known Secondary structure																																				T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		323
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions