Job Description P78055 Confidence 28.03% Date Thu Jan 5 12:33:06 GMT 2012 Rank 203 Aligned Residues 181 % Identity 14% Template d2b4ga1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.95

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.																90	.	.	.	.	.	.
Predicted Secondary structure																	.																											.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																											.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	.	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	.	.	.	.	I	I	A	D	I	V	V	K	V	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	L	A	A	I
Query Conservation																	.																											.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																											.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	V	D	F	Y	L	S	Y	A	A	Q	T	H	D	Y	S	R	K	P	L	F	L	S	M	S	G	L	S	V	E	E	S	V	E	M	V	K	K	L	V	P	I	T	K	E	K	G	T	I	L	E	L	N	L	S	C	P	N	V	P	G	K	P	Q	V	G	Y	D	F	D	T	T	R	T	Y	L	Q	K	V
Template Known Secondary structure		S												T			T	T	T										S	S																															S	T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																			.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	M	L	K	A	E	G	I	P	T	L	G	T	A	V	Y	G	.	.	.	.	.	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	L	H
Query Conservation																			.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	A	Y	G	L	P	F	G	V	K	M	P	P	Y	F	D	I	A	H	F	D	M	A	A	A	V	L	N	D	F	P	L	V	K	F	I	T	C	V	N	S	I	G	N	G	L	V	I	D	P	A	N	E	T	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	K	Y	V	L	P	T	A	L	A	N	V
Template Known Secondary structure							S																							T	T		T	T																		T	T	T	T			S			G	G	G	G							G	G	G
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	S	.	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A	F	G	R	T	S	I
Query Conservation																		.
Alig confidence																		.																											.	.	.
Template Conservation																																													.	.	.
Template Sequence		N	A	F	F	R	R	C	P	D	K	L	V	F	G	C	G	G	V	Y	S	G	E	E	A	F	L	H	I	L	A	G	A	S	M	V	Q	V	G	T	A	L	H	D	.	.	.	E	G	P	I	I	F	A	R	L	N	K	E	L	Q	E	I	M	T	N	K	G	Y	K	T	L
Template Known Secondary structure									T	T	S						S	S			S											T							S						.	.	.			T	T																	T			S	G
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions