Job Description P78055 Confidence 37.40% Date Thu Jan 5 12:33:06 GMT 2012 Rank 182 Aligned Residues 165 % Identity 13% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																													.					.															.																.
Query SS confidence																																													.					.															.																.
Query Sequence		L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	.	I	V	V	K	.	V	P	V	T	A	E	G	L	A	A	I	K	M	L	.	K	A	E	G	I	P	T	L	G	T	A	V	Y	G	A	.
Query Conservation																																													.					.															.																.
Alig confidence																																													.					.															.																.
Template Conservation
Template Sequence		V	A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	V	T	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V
Template Known Secondary structure														S	S											S	S														T	T		S																									T								T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
														115	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	.	.	.	A	P	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	L	H	Q	L	L	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	P	Q	A	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.				.						.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.						.	.	.					.
Template Sequence		I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K	C	L	R	L	S	G	G	D	H	L	H	S	G	T	V	V	.	G	K	L	E	G	.	.	.	D	K	A	S	.	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L
Template Known Secondary structure				S		S	S	S	S																S							S	S	.	S	S	S			.	.	.					.											S					B	G	G	G	T	B		S					T	T
Template Predicted Secondary structure																																		.						.	.	.					.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.				.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		163	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure						.	.	.	.																			.																.
Query SS confidence						.	.	.	.																			.																.
Query Sequence		L	A	A	S	.	.	.	.	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	.	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	.	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A
Query Conservation						.	.	.	.																			.																.
Alig confidence						.	.	.	.												.	.						.								.	.	.	.					.
Template Conservation																					.	.														.	.	.	.
Template Sequence		P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	.	.	G	D	D	S	V	L	Q	F	G	G	G	T	L	.	.	.	.	G	H	P	W	G	N	A	P	G	A	T	A	N	R	V	A	L	E	A	C
Template Known Secondary structure						S	S			G	G	G									.	.		S	S						S					.	.	.	.	T	S	T	T
Template Predicted Secondary structure																					.	.														.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.					.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions