Job Description P78055 Confidence 95.45% Date Thu Jan 5 12:33:06 GMT 2012 Rank 64 Aligned Residues 179 % Identity 11% Template d1juba_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.40

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																		90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	I	V	V	K	V	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	L	A	A	I	K	M	L	K	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	D	Y	V	L	K	N	Q	K	E	N	A	Q	E	G	P	I	F	F	S	I	A	G	M	S	A	A	E	N	I	A	M	L	K	K	I	Q	E	S	D	F	S	G	I	T	E	L	N	L	S	C	P	N	V	P	G	E	P	Q	L	A	Y	D	F	E	A	T	E	K	L	L	K	E	V	F	T	F	F	T
Template Known Secondary structure													T		S	S	S									S	S														S				S						S					S	S	S				G	G	G													T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.													.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	I	P	T	L	G	T	A	V	Y	G	A	A	Q	.	.	.	.	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	.	.	.	.	.	.	.	.	.	.	V	N	R	I	D	A	Q	G	G	S	G	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	T	V	T	D	L	H	Q	L	L	K	M
Query Conservation																	.	.	.	.																.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	L	G	V	K	L	P	P	Y	F	D	L	V	H	F	D	I	M	A	E	I	L	N	Q	F	P	L	T	Y	V	N	S	V	N	S	I	G	N	G	L	F	I	D	P	E	A	E	S	V	V	I	K	P	K	D	G	F	G	G	I	G	G	A	Y	I	K	P	T	A	L	A	N	V	R	A	F	Y	T	R
Template Known Secondary structure		S											S												T	T	S																			T	T	T	T			S		S	G	G	G	G						S	G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		H	A	P	Q	A	K	V	L	A	A	S	.	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A	F	G	R	T	S	I
Query Conservation													.
Alig confidence													.																											.	.	.
Template Conservation																																								.	.	.
Template Sequence		L	K	P	E	I	Q	I	I	G	T	G	G	I	E	T	G	Q	D	A	F	E	H	L	L	C	G	A	T	M	L	Q	I	G	T	A	L	H	K	.	.	.	E	G	P	A	I	F	D	R	I	I	K	E	L	E	E	I	M	N	Q	K	G	Y	Q	S	I
Template Known Secondary structure		S		T	T	S						S	S			S											T		S											.	.	.			T																		T			S	G
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions