Job Description P78055 Confidence 38.44% Date Thu Jan 5 12:33:06 GMT 2012 Rank 177 Aligned Residues 184 % Identity 11% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.		.	.	.	.												30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure				.					.	.	.	.	.	.	.	.	.	.	.																							.															.	.
Query SS confidence				.					.	.	.	.	.	.	.	.	.	.	.																							.															.	.
Query Sequence		G	V	.	T	T	N	P	.	.	.	.	.	.	.	.	.	.	.	S	I	I	A	A	G	K	K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	.	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	.	.	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	I	V	V	K	V	P	V
Query Conservation				.					.	.	.	.	.	.	.	.	.	.	.																							.															.	.
Alig confidence				.					.	.	.	.	.	.	.	.	.	.	.																							.															.	.																				.
Template Conservation																																																																														.
Template Sequence		G	I	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H	S	S	T	P	I	V	L	M	T	Y	Y	N	P	I	Y	R	A	G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	.	V	V	D
Template Known Secondary structure						S			T	T	S														T	T															T	T																														T						.		T	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.
		89			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure			.	.																	.	.
Query SS confidence			.	.																	.	.
Query Sequence		T	.	.	A	E	G	L	A	A	I	K	M	L	K	A	E	G	I	P	.	.	T	L	G	T	A	V	Y	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A
Query Conservation			.	.																	.	.
Alig confidence			.	.																	.	.																										.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		L	P	V	F	H	A	K	E	F	T	E	I	A	R	E	E	G	I	K	T	V	F	L	A	A	P	N	T	P	D	E	R	L	K	V	I	D	D	M	T	T	G	F	V	Y	L	.	.	.	.	.	.	V	S	L	Y	E	I	P	K	T	A	Y	D	L	L	R	R	A	K	R	I	C	R	N	K	V	A	V	G
Template Known Secondary structure				G	G	G												T									T	T														S	S					.	.	.	.	.	.																						S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	S	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	.	A	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		F	G	V	S	K	R	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I	I	G	E	K	G	R	E	A	T	E	F	L	K	K	K	V	E	E	L	L	G	I
Template Known Secondary structure		S				S										T	T		S																G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions