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Job DescriptionP78055
Confidence83.84%DateThu Jan 5 12:33:06 GMT 2012
Rank104Aligned Residues199
% Identity13%Templatec3tfxB_
PDB info PDB header:lyaseChain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5'-phosphate decarboxylase from2 lactobacillus acidophilus
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10........ .20.........30.........40.........50.........60 .........70.........80
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Query Sequence  LDTSDVVAVKALSR. . . IFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQV. MATTAEGMVNDALKLRSIIA
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Template Sequence  LDLDNEEQLNKILSKLGDPHDVFVKVGXELFYNAGIDVIKKLTQQ. . . . . . GYKIFLDLKXHDIPNTVYNGAKALAKLGI
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   910.........20.........30.........40.........50... ......60.........70.........80..
 
   81...... ..90.........100..... ....110.........120.... .....130.........140......
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Query Sequence  DIVVKVP. VTAEGLAAIKMLKAEGIP. . . . . . . . TLGTAVYGAAQGLLSALAG. . . . . AEYVAPYVNRIDAQGGSGIQTV
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Template Sequence  TFTTVHALGGSQXIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPXAEQVLSLAKXAKHSGADGVICS
Template Known Secondary structure  SGGG


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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   147..150.........160.........170.........180.........190.........200.........210...
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Query Sequence  TDLHQLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQG
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Template Sequence  PLEVKKLHENIGDDFLYVTPGIRPATPKXAKEWGSSAIVVGRPIT. . . . LASDPKAAYEAIKKEFNA
Template Known Secondary structure  TTT
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   163......170.........180.........190.........200....... ..210.........220.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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