Job Description P78055 Confidence 83.84% Date Thu Jan 5 12:33:06 GMT 2012 Rank 104 Aligned Residues 199 % Identity 13% Template c3tfxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5'-phosphate decarboxylase from2 lactobacillus acidophilus Resolution 2.19 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.	.	.																																											.
Query SS confidence																.	.	.																																											.
Query Sequence		L	D	T	S	D	V	V	A	V	K	A	L	S	R	.	.	.	I	F	P	L	A	G	V	T	T	N	P	S	I	I	A	A	G	K	K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	.	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A
Query Conservation																.	.	.																																											.
Alig confidence																.	.	.																													.	.	.	.	.	.									.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		L	D	L	D	N	E	E	Q	L	N	K	I	L	S	K	L	G	D	P	H	D	V	F	V	K	V	G	X	E	L	F	Y	N	A	G	I	D	V	I	K	K	L	T	Q	Q	.	.	.	.	.	.	G	Y	K	I	F	L	D	L	K	X	H	D	I	P	N	T	V	Y	N	G	A	K	A	L	A	K	L	G	I
Template Known Secondary structure					S	S										T	T			G	G	G											T	T	S		T										.	.	.	.	.	.	T											S														T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.																			.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence									.																			.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		D	I	V	V	K	V	P	.	V	T	A	E	G	L	A	A	I	K	M	L	K	A	E	G	I	P	.	.	.	.	.	.	.	.	T	L	G	T	A	V	Y	G	A	A	Q	G	L	L	S	A	L	A	G	.	.	.	.	.	A	E	Y	V	A	P	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V
Query Conservation									.																			.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence									.																			.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		T	F	T	T	V	H	A	L	G	G	S	Q	X	I	K	S	A	K	D	G	L	I	A	G	T	P	A	G	H	S	V	P	K	L	L	A	V	T	E	L	T	S	I	S	D	D	V	L	R	N	E	Q	N	C	R	L	P	X	A	E	Q	V	L	S	L	A	K	X	A	K	H	S	G	A	D	G	V	I	C	S
Template Known Secondary structure		S						G	G	G																		T	T											S		T	T									T	S			S	S																T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	S	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G
Query Conservation
Alig confidence																																															.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		P	L	E	V	K	K	L	H	E	N	I	G	D	D	F	L	Y	V	T	P	G	I	R	P	A	T	P	K	X	A	K	E	W	G	S	S	A	I	V	V	G	R	P	I	T	.	.	.	.	L	A	S	D	P	K	A	A	Y	E	A	I	K	K	E	F	N	A
Template Known Secondary structure		T	T	T										S	S	S																		T	T		S										.	.	.	.	T	S	S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions