Job Description P78055 Confidence 47.66% Date Thu Jan 5 12:33:06 GMT 2012 Rank 159 Aligned Residues 201 % Identity 12% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure							.	.															.	.																																										.
Query SS confidence							.	.															.	.																																										.
Query Sequence		M	E	L	Y	L	.	.	D	T	S	D	V	V	A	V	K	A	L	S	R	I	.	.	F	P	L	A	G	V	T	T	N	P	S	I	I	A	A	G	K	K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	.	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L
Query Conservation							.	.															.	.																																										.
Alig confidence							.	.															.	.																		.	.	.												.	.									.
Template Conservation																																										.	.	.												.	.
Template Sequence		M	K	L	C	V	A	L	D	L	S	T	K	E	E	C	L	Q	L	A	K	E	L	K	N	L	D	I	W	L	K	V	G	L	R	A	Y	L	R	D	G	.	.	.	F	K	F	I	E	E	L	K	K	V	D	.	.	D	F	K	I	F	L	D	L	K	F	H	D	I	P	N	T	M	A	D	A	C	E	E	V
Template Known Secondary structure											S	S											T	T	T	S	S															.	.	.												.	.												S
Template Predicted Secondary structure																																										.	.	.												.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																				.	.	.	.	.																									.
Query SS confidence																			.	.																				.	.	.	.	.																									.
Query Sequence		R	S	I	I	A	D	I	V	V	K	V	P	V	T	A	E	G	.	.	L	A	A	I	K	M	L	K	A	E	G	I	P	T	L	G	T	A	V	.	.	.	.	.	Y	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	.	D	A	Q	G	G	S	G	I	Q	T	V	T
Query Conservation																			.	.																				.	.	.	.	.																									.
Alig confidence																			.	.																				.	.	.	.	.																									.
Template Conservation
Template Sequence		S	K	L	G	V	D	M	I	N	I	H	A	S	A	G	K	I	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	V	L	A	V	S	A	L	T	S	F	D	E	E	N	F	F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G	L	D	G	M	V	C	S	V
Template Known Secondary structure			T	T	T		S						G	G	G													T	T	S	S	S									S		T	T											S	S																T	T								T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	S	F	K	T	P	R	.	.	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	V	D	A	A	V	A	K	F	E	Q	D
Query Conservation																										.	.
Alig confidence																										.	.																				.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		F	E	S	K	K	I	K	E	H	T	S	S	N	F	L	T	L	T	P	G	I	R	P	F	G	A	N	L	A	M	A	R	E	N	L	S	D	Y	I	V	V	G	R	P	I	.	.	.	.	Y	K	N	E	N	P	R	A	V	C	E	K	I	L	N	K
Template Known Secondary structure		T	T								S		T	T	S						S			T	T										T	T		S									.	.	.	.		T	S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions