Job Description P78055 Confidence 74.67% Date Thu Jan 5 12:33:06 GMT 2012 Rank 121 Aligned Residues 155 % Identity 14% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																.	.																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	V	V	L	P	Q	L	H	E	A	M	G	G	.	.	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	.	A	D	I	V	V	K	V	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	L	A	A	I	K	M	L	K	A
Query Conservation																.	.																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	T
Template Known Secondary structure															S	T	T											S	S										T	T	T	S	S			S							S				S					G	G	G													T	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130																			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		E	G	I	P	T	L	G	T	A	V	Y	G	A	A	Q	.	.	.	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	.	L	H	Q	L	L	K	M	H	A	P	Q
Query Conservation																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		K	P	L	G	I	K	L	P	P	Y	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S
Template Known Secondary structure		S																											S																T	T						G	G	G							G	G	G													T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	L	A	A	S	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	I	I	G	T	G	G	V	T	G	R	D	A	F	E	H	I	L	C	G	A	S	M	V	Q	I	G	T	A	L	H	Q	E
Template Known Secondary structure		S						S														T		S					S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions