Job Description P78055 Confidence 86.11% Date Thu Jan 5 12:33:06 GMT 2012 Rank 100 Aligned Residues 158 % Identity 22% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		V	A	V	K	A	L	S	R	I	F	P	L	A	G	V	T	T	N	P	S	I	I	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	.	.	.	.	.	.	.	M	A	T	T
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		K	L	C	S	E	A	A	E	Y	K	.	F	A	S	V	C	V	N	P	T	W	V	P	L	C	A	E	L	L	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G	A	E	E	V	D	M	V	I	N	I	G	M	V	K	A	K	K
Template Known Secondary structure											T	.		S						G	G	G								T	T	T	S	S								S	T	T	T			S															T	T		S													T	T
Template Predicted Secondary structure												.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	I	V	V	K	V	P	V	.	.	.	.	.	T	A	E	G	L	A	A	I	K	M	L	K	A	E	G	I	P	T	L	G	T	A	V	Y	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	D	A	Q	G
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	Y	L	T	N	E	E	K	V	E	V	C	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	A	A	G	A	E	Y	V	K	T	S	T	G	F	.	.	G	T	H
Template Known Secondary structure																	T	T	S								G	G	G	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T		S							S	S	.	.	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																												.																				.	.
Query SS confidence																												.																				.	.
Query Sequence		G	S	G	I	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	.	S	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	.	.	T	L	P	L	D	V	A	Q	Q	M
Query Conservation																												.																				.	.
Alig confidence																.	.	.										.																				.	.
Template Conservation																.	.	.
Template Sequence		G	A	T	P	E	D	V	K	L	M	K	D	T	V	.	.	.	G	D	K	A	L	V	K	A	A	G	G	I	R	T	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I	G	A	S	A	G	I	A	I	L	N	G	I
Template Known Secondary structure																.	.	.	T	T	S	S						S	S			S										T	T							S								T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions