Job Description P78055 Confidence 57.71% Date Thu Jan 5 12:33:06 GMT 2012 Rank 142 Aligned Residues 127 % Identity 10% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																					.									.																										.	.
Query SS confidence																					.									.																										.	.
Query Sequence		M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	.	A	D	I	V	V	K	V	P	.	V	T	A	E	G	L	A	A	I	K	M	L	K	A	E	G	I	P	T	L	G	T	A	V	Y	.	.	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	D
Query Conservation																					.									.																										.	.
Alig confidence																					.									.																										.	.
Template Conservation
Template Sequence		A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q
Template Known Secondary structure																				T		S							G	G	G													T	S			S	S								S											T	T		S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		137	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																							.	.														.	.	.	.
Query SS confidence								.	.	.	.	.	.																							.	.														.	.	.	.
Query Sequence		A	Q	G	G	S	G	.	.	.	.	.	.	I	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	.	.	A	S	F	K	T	P	R	Q	A	L	D	C	L	.	.	.	.	L	A	G	C	E	S	I	T	L	P
Query Conservation								.	.	.	.	.	.																							.	.														.	.	.	.
Alig confidence								.	.	.	.	.	.																							.	.														.	.	.	.
Template Conservation
Template Sequence		Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A
Template Known Secondary structure																											T	T								T	T	G	G	G	S																		S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions