Return to main results Retrieve Phyre Job Id

Job DescriptionP78055
Confidence24.20%DateThu Jan 5 12:33:06 GMT 2012
Rank211Aligned Residues116
% Identity17%Templatec3cyjA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme-2 like protein from rubrobacter xylanophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60 .........70.........80.........90.........100.. ...... .110.....
Predicted Secondary structure 




.








...


.

Query SS confidence 



















.









































. . .





.






Query Sequence  VVLPQLHEAMGGQGRLFAQV. MATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAE. . . GIPTLG. TAVYGAA
Query Conservation       
       
 




.   
 
     
  
     
  



 
  
  
   
   ...

 

 .
 


  
Alig confidence 



















.









































...





.






Template Conservation    
  

   
    
  


       
      
     
  



    
      
       



 

      
Template Sequence  ERVRAAREAIGESVELMVDANGAYTRKQALYWAGAFAREAGISYLEEPVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLP
Template Known Secondary structure 
TTS
TT
S




SS
TT
S
TT

TT

S
Template Predicted Secondary structure 





























Template SS confidence 















































































   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   116...120.........130.........140.........150.........160..
Predicted Secondary structure 












Query SS confidence 














































Query Sequence  QGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKV
Query Conservation 

  

 


 









  
 

   
             
 
Alig confidence 






.











.....





















Template Conservation         .  
 
  
    .....



    
   
   

    
Template Sequence  QLHDLAG. CVDILQADVTRC. . . . . GGITGLLRVDGICRGHQIPFSA
Template Known Secondary structure  T.T
S
TTTT.....TTTT

Template Predicted Secondary structure 
.







.....



Template SS confidence 














































   254.....260 .........270.. .......280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions