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Job DescriptionP78055
Confidence100.00%DateThu Jan 5 12:33:06 GMT 2012
Rank12Aligned Residues210
% Identity30%Templatec3clmA_
PDB info PDB header:lyaseChain: A: PDB Molecule:transaldolase; PDBTitle: crystal structure of transaldolase (yp_208650.1) from neisseria2 gonorrhoeae fa 1090 at 1.14 a resolution
Resolution1.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........
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Query Sequence  ELYLDTSDVV. . . . . AVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEA. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QIWLDNLSRSLVQSGELAQXLKQG. VCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPKQRYETXAVADVRAACDVCL
Template Known Secondary structure  S


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TTTTSS

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   13......20.........30...... ...40.........50.........60.........70.........80.........90.
 
   50.........60 .........70........ .80.........90.........100.........110........
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Query Sequence  . . . . . . MGGQGRLFAQV. . . MATTAEGMVNDALKLRSI. . IADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGL
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Template Sequence  AEHESTGGKTGFVSLEVSPELAKDAQGTVEEARRLHAAIARKNAXIKVPATDAGIDALETLVSDGISVNLTLLFSRAQTL
Template Known Secondary structure  TTSSS



GGGTT


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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   119120..... ....130....... ..140.........150.... ....
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Query Sequence  LSALAGA. . . . . . . . . . . . . . . . . EYVAPYVNRIDA. . . . . . . . . . QGGSGIQTVTDLHQLLK. . . . . . . . . . . . . MHAP
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Template Sequence  KAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDSALDATLPDRLKGKTAIALAKAAYQDWEQYFTAPEFAALEAQGAN
Template Known Secondary structure  TT


TT


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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   159160...... ...170.........180.... .....190.........200.
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Query Sequence  QAKVLAAS. . . . . . . FKTPRQALDCLLAGCESI. TLPLDVAQQMISYPAVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RVQLLWASTGVKNPAYPDTLYVD. . SLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAA
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   252.......260.........270.... .....280.........290.........300.........310.........320.........
 
   202.......210....
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Query Sequence  . . . . AAVAKFEQDWQGA
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Template Sequence  RLQEDGLKQFEEAFEKL
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   330.........340......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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