Job Description P78055 Confidence 38.16% Date Thu Jan 5 12:33:06 GMT 2012 Rank 178 Aligned Residues 127 % Identity 13% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																					.									.																										.	.
Query SS confidence																					.									.																										.	.
Query Sequence		M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	.	A	D	I	V	V	K	V	P	.	V	T	A	E	G	L	A	A	I	K	M	L	K	A	E	G	I	P	T	L	G	T	A	V	Y	.	.	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	D
Query Conservation																					.									.																										.	.
Alig confidence																					.									.																										.	.
Template Conservation
Template Sequence		A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K
Template Known Secondary structure																				T		S							G	G	G														S			S	S								S											T	T		S								S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure									.																						.	.	.	.	.	.	.
Query SS confidence									.																						.	.	.	.	.	.	.
Query Sequence		A	Q	G	G	S	G	I	.	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	.	.	.	.	.	.	.	A	S	F	K	T	P	R	Q	A	L	D	C	L	L	A	G	C	E	S	I	T	L	P
Query Conservation									.																						.	.	.	.	.	.	.
Alig confidence									.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A
Template Known Secondary structure																								T	T	S							S	S	T	T	T	S													G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions