Job Description P78055 Confidence 26.02% Date Thu Jan 5 12:33:06 GMT 2012 Rank 206 Aligned Residues 168 % Identity 15% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																															.	.	.	.															.
Query SS confidence																																																															.	.	.	.															.
Query Sequence		L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	I	V	V	K	V	P	V	T	A	E	G	L	A	A	I	K	M	L	.	.	.	.	K	A	E	G	I	P	T	L	G	T	A	V	Y	G	.
Query Conservation																																																															.	.	.	.															.
Alig confidence																										.																					.																.	.	.	.															.
Template Conservation																										.																					.
Template Sequence		L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	.	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	.	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A
Template Known Secondary structure														S	S							B			S	.	S														T	T					.																							T								T	T	T
Template Predicted Secondary structure																										.																					.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
														114	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	.	.	.	A	P	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	S	F	K	T	P	R	Q	A	L	D	C	L	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.				.																										.																				.
Template Conservation																																			.																										.
Template Sequence		A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T	A	V	.	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	.	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R
Template Known Secondary structure					S		T	T	S															T		S									.	S	S																	S		B	T	T	B		.								S	S			G	G	G
Template Predicted Secondary structure																																			.																										.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		178	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure									.																.
Query SS confidence									.																.
Query Sequence		L	A	G	C	E	S	I	.	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	.	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A
Query Conservation									.																.
Alig confidence									.								.	.	.	.					.
Template Conservation																	.	.	.	.
Template Sequence		L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	.	.	.	.	G	H	P	D	G	P	R	A	G	A	K	A	L	R	D	A	I	D	A	A
Template Known Secondary structure					S	S											.	.	.	.	T		T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions