Job Description P78055 Confidence 75.43% Date Thu Jan 5 12:33:06 GMT 2012 Rank 119 Aligned Residues 165 % Identity 15% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.														.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	K	P	L	D	V	V	L	P	Q	L	H	E	A	M	G	G	Q	G	R	L	F	A	Q	V	M	A	T	T	A	E	G	M	V	N	D	A	L	K	L	R	S	I	I	A	D	.	.	.	I	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	T	A	E	G	L	A	A	I	K	M
Query Conservation																																																	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I
Template Known Secondary structure		S		S													G	G	G		S							T	T	S															T	T			G	G	G					S							T	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	E	G	I	P	T	L	G	T	A	V	Y	G	A	A	Q	G	L	L	S	A	L	A	G	A	E	Y	V	A	P	Y	V	N	R	I	D	A	Q	G	G	S	G	I	Q	T	V	T	D	L	H	Q	L	L	K	M	H	A	P	Q	A	K	V	L	A	A	S	F	K	T	P	R	Q	A	L	D	C	L	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.													.	.	.	.	.
Template Sequence		R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	.	.	.	.	.	.	R	G	V	S	L	L	S	D	I	K	Q	R	.	.	.	.	.	I	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q
Template Known Secondary structure						T	T									S										T	T		S									.	.	.	.	.	.													.	.	.	.	.			S						S	S			G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	C	E	S	I	T	L	P	L	D	V	A	Q	Q	M	I	S	Y	P	A	V	D	A	A	V	A	K	F	E	Q	D	W	Q	G	A
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		A	G	A	D	G	I	A	V	M	S	G	I	F	.	.	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M
Template Known Secondary structure		T	T		S					S					.	.	.	.	T	S	S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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