Job Description P75855 Confidence 99.87% Date Thu Jan 5 12:15:03 GMT 2012 Rank 9 Aligned Residues 138 % Identity 20% Template d1pdkb_ SCOP info Common fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	I	A	P	A	C	T	L	V	A	A	T	K	D	S	V	V	T	L	P	D	V	S	A	T	K	L	Q	T	N	G	Q	V	S	G	V	Q	I	D	V	P	I	E	L	K	D	C	D	T	T	V	.	T	K	N	A	T	F	T	F	N	G	T	A	D	T	T	Q	I	T	A	F	A	N	Q	A	S	S	D	A
Query Conservation																																																					.
Alig confidence																																			.																		.																								.	.
Template Conservation																																			.																																										.	.
Template Sequence		L	L	D	R	P	C	H	V	S	G	D	S	L	N	K	H	V	V	F	K	T	R	A	S	R	D	F	W	Y	P	P	G	R	.	S	P	T	E	S	F	V	I	R	L	E	N	C	H	A	T	A	V	G	K	I	V	T	L	T	F	K	G	T	E	E	A	A	L	P	G	H	L	K	V	T	.	.	G	V	N
Template Known Secondary structure					S	T	T				S	S	T	T	S														S	S	T	T		B	.												S			T	T	T															T	T								B	.	.	S	T	T
Template Predicted Secondary structure																																			.																																										.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																						.	.	.	.	.	.
Query SS confidence																								.	.	.																						.	.	.	.	.	.
Query Sequence		A	T	N	V	A	L	Q	M	Y	M	N	D	G	T	T	A	I	T	P	D	T	E	.	.	.	T	G	N	I	L	L	Q	D	G	D	Q	T	L	T	F	K	V	D	Y	I	A	.	.	.	.	.	.	T	G	K	A	T	S	G	N	V	N	A	V	T	N	F	H	I	N	Y
Query Conservation																								.	.	.																						.	.	.	.	.	.
Alig confidence																								.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	R	L	G	I	A	L	L	D	T	D	G	S	S	L	L	K	P	G	T	S	H	N	K	G	Q	G	E	K	V	T	G	N	S	L	E	L	P	F	G	A	Y	V	V	A	T	P	E	A	L	R	T	K	S	V	V	P	G	D	Y	E	A	T	A	T	F	E	L	T	Y
Template Known Secondary structure		B	T	T								T	T	S	S	S	B			T	T	S	B			S	S	T	T		B			T	T	S																		T	T				S	S			B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions