Job Description P76321 Confidence 99.02% Date Thu Jan 5 12:21:47 GMT 2012 Rank 47 Aligned Residues 127 % Identity 20% Template d2omxa2 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Internalin LRR domain Resolution 1.70

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																												.	60	.	.	.	.
Predicted Secondary structure																					.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	.	.	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	I	Q	I	P	K	F	C	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	D	F	N	N
Query Conservation																					.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	V	T	T	L	Q	A	D	R	L	G	I	K	S	I	D	G	V	E	Y	L	N	N	L	T	Q	I	N	F	S	N	N	Q	L	T	D	I	T	P	L	K	N	L	T	K	L	V	D	I	L	M	N	N	N	Q	I	A	D	I	T	P	L	A	N	L	T	N	L	T	G	L	T	L	F	N	N	Q	I	T
Template Known Secondary structure		T	T							T	T	S						T	T	G	G	G		T	T								S	S						G	G	G	T	T		T	T								S	S						G	G	G	T	T		T	T		S						S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																											.	.																							.	.
Query SS confidence																											.	.																							.	.
Query Sequence		Y	M	V	F	P	K	V	S	D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	.	.	S	S	P	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M
Query Conservation																											.	.																							.	.
Alig confidence																											.	.																							.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		D	I	D	P	L	K	N	L	T	N	L	N	R	L	E	L	S	S	N	T	I	S	D	I	S	A	L	S	G	L	T	S	L	Q	Q	L	N	F	S	S	N	Q	V	T	D	L	K	P	L	A	N	L	T	T	L	E	R	L	D	I	S	S	N	K	V	S	D	I	S	V	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G	T	T		T	T		S						S	S						G	G	G	T	T		T	T		S						S	S						G	G	G	T	T		T	T								S	S						G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	D	I	E	V	V	S	A	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	K	L	T	N	L	E	S	L
Template Known Secondary structure		.	G	G		T	T		S	B
Template Predicted Secondary structure		.
Template SS confidence
			227	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions