Job Description P76321 Confidence 95.00% Date Thu Jan 5 12:21:47 GMT 2012 Rank 75 Aligned Residues 166 % Identity 6% Template d2astb2 SCOP info Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2 Resolution 2.30

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.
Predicted Secondary structure																													.	.	.																	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																													.	.	.																	.	.	.	.	.	.																						.	.	.	.
Query Sequence		V	R	L	F	K	C	V	E	L	H	N	S	K	L	D	L	T	D	L	H	L	G	S	L	P	P	L	.	.	.	P	S	W	I	E	V	L	Y	L	R	H	N	G	L	A	T	.	.	.	.	.	.	I	Q	I	P	K	F	C	K	E	L	E	L	D	F	N	N	Y	M	V	F	P	.	.	.	.	K	V	S
Query Conservation																													.	.	.																	.	.	.	.	.	.																						.	.	.	.
Alig confidence																													.	.	.																	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		D	V	T	G	R	L	L	S	Q	G	V	I	A	F	R	C	P	R	S	F	M	D	Q	P	L	A	E	H	F	S	P	F	R	V	Q	H	M	D	L	S	N	S	V	I	E	V	S	T	L	H	G	I	L	S	Q	C	S	K	L	Q	N	L	S	L	E	G	L	R	L	S	D	P	I	V	N	T	L	A	K	N
Template Known Secondary structure										T	T		S					T	T					S				S					B								T	T													T	T	B				S					T	T		B										T	T
Template Predicted Secondary structure
Template SS confidence
		2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																				.	.
Query SS confidence																						.	.	.	.	.	.																				.	.
Query Sequence		D	G	I	T	Q	V	S	V	D	N	N	L	I	S	R	V	D	S	S	P	.	.	.	.	.	.	S	K	A	M	T	I	S	I	Y	R	N	K	I	W	X	I	P	A	M	.	.	P	E	T	T	K	L	F	N	C	G	D	N	K	I	K	E	I	Q	Y	F	P	N	H	L	E	K	A	R	M	E	C	D	I
Query Conservation																						.	.	.	.	.	.																				.	.
Alig confidence																						.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		S	N	L	V	R	L	N	L	S	G	C	S	G	F	S	E	F	A	L	Q	T	L	L	S	S	C	S	R	L	D	E	L	N	L	S	W	C	F	D	F	T	E	K	H	V	Q	V	A	V	A	H	V	S	E	T	I	T	Q	L	N	L	S	G	Y	R	K	N	L	Q	K	S	D	L	S	T	L	V	R	R	C
Template Known Secondary structure		T	T		S					T	T		B	S														T	T										T	T													S		T	T								S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		E	V	V	S	A	I	Y	S	N	K	E	L	L	.	.	.	.	.	.	.	.	F	K	E	C	N	S	F	E	E	T	F	L	Y	H
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	L	V	H	L	D	L	S	D	S	V	M	L	K	N	D	C	F	Q	E	F	F	Q	L	N	Y	L	Q	H	L	S	L	S	R
Template Known Secondary structure		T	T		S					T	T		T	T			G	G	G	G	G	G	G	G	G		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions